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I know it's not good form to reply to my own post, but:
After a 'tail -f' on stderr.log during the upload I get this just before the 503 error is returned:
[FATAL] failed to allocate memory
[FATAL] failed to allocate memory
[FATAL] failed to allocate memory
Funny thing is that there is a lot of free memory on the machine. The file is being uploaded into a mysql longblob field but since it works OK in webrick on the same machine I doubt that is the issue...
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